- Historical Alumni, Faculty, and other Biographical Files, 1839/19381
- Historical Grade Books, 1840/19191
- Horace P. Meader papers, 1863/19281
- James J. Phillips collection, 1853/18901
- Jennings C. Wise papers, 1910/19601
- John D. Imboden papers, 1862/18911
- John E. Roller papers, 1862/19101
- John F. Bransford papers, 1865/19161
- John L. Cochran papers, 1879/18851
- John S. Bagnall papers, 1862/19211
- John S. Illig scrapbook, 1846/19031
- John S. Webb papers, 1883/19051
- John T. L. Preston papers, 1806/18892
- Jordan Family papers, 1860/19161
- Jubal A. Early papers, 1864/18891